- Linux Cluster from Dell Inc. under support from National Science Foundation
- 16 nodes, 2 Xeon processors (2.3 GHz), and 2 GB memory per node
- Queuing system: Platform Lava, Platform Computing Inc.
- Programming Language: Intel FORTRAN 90 and Intel C/C++
- Library Installed: BLAS, BLACS, ATLAS, LAPACK, ScaLAPACK, OPENMPI
This is not a blog, but my notes and tips for research. Feel free to take any information and leave any comments or questions.
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Tuesday, July 31, 2007
Dell-made 16-node cluster: 2006 version
My third cluster from Dell Inc.
Home-made 16-PC cluster: 2001 version
Friday, July 20, 2007
Conditions for Equilibrium
"The condition of statistical equilibrium is given by the most probable condition of a closed system, and therefore the entropy is a maximum when a closed system is in the equilibrium condition."
--- Elementary Statistical Physics by C. Kittel ---
--- Elementary Statistical Physics by C. Kittel ---
Friday, July 6, 2007
Kmail Backup
Using Ubuntu Linux, I somehow have to backup my files associated to Kontact applications such as Kmail, Kalendar, and Knote. The followings are files and directories under a user home directory, used by each of the applications.
1. Kmail:
.kde/share/apps/kmail/
.kde/share/config/kmailrc
2. You can export a current Calendar in Kontact as "iCalendar" format, save it with a unique name in a directory, and add it to Calendar again. Do not need to backup the files under .kde directory. "To-do List" and "Journal" are also included in the "iCalendar" file of the ".ics" extension.
3. Knote:
.kde/share/apps/knote/
1. Kmail:
.kde/share/apps/kmail/
.kde/share/config/kmailrc
2. You can export a current Calendar in Kontact as "iCalendar" format, save it with a unique name in a directory, and add it to Calendar again. Do not need to backup the files under .kde directory. "To-do List" and "Journal" are also included in the "iCalendar" file of the ".ics" extension.
3. Knote:
.kde/share/apps/knote/
Wednesday, July 4, 2007
Replacing characters using vi editor
To replace character "old" by "new" in a file "myfile.txt",
1) Open the file using vi editor:
vi myfile.txt
2) Use keystrokes of Esc, followed by
which will replace all "old" with "new" within the entire document.
1) Open the file using vi editor:
vi myfile.txt
2) Use keystrokes of Esc, followed by
:1,$s/old/new/
or:%s/old/new/
which will replace all "old" with "new" within the entire document.
Sunday, July 1, 2007
Useful LSF commands
The following commands can be executed in the Linux shell prompt to see status of queuing system, LSF (Load Sharing Facility) from Platform Computing Inc.
- bacct - displays accounting statistics about finished jobs
- bhist - displays historical information about jobs
- bhosts - displays hosts and their static and dynamic resources
- bjobs - displays information about LSF jobs (e.g. bjobs -u all)
- bsub - submits a batch job to LSF
- bpeek - displays the stdout and stderr output of an unfinished job
- bqueues - displays information about queues.
- lsclusters - displays configuration information about LSF clusters
- lshosts - displays static resource information about hosts.
- lsid - displays the current LSF version number, the cluster name, and the master host
name - lsload - displays load information for hosts
- lsinfo - displays all load sharing configuration information
- lsmon (xlsmon) - displays load information for LSF hosts and periodically updates the display
- lsrun - submits a task to LSF for execution.
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